Credit Notes against cancellation of Invoices issued to SEZ Developer

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Dipesh (Querist)
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26 June 2025 We issued service invoice (June-24) to SEZ unit, now customer is not accepting this invoices. Now we have to cancel this invoices through issuing credit notes ? In this scenario what will be the question arises in GST audit or scrutiny because cancellation transactions are more than expected. May department ask to pay IGST or some penalties in future while doing audit ???

Please elaborate.

Thanks in advance.

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