Why Your ITR Refund Is on Hold: Explaining the Income Tax Risk Management Alert

Gautam Bharthry , Last updated: 25 December 2025  
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A recent SMS alert from the Income Tax Department has triggered widespread confusion and anxiety among taxpayers, as many individuals reported receiving messages stating that their Income Tax Return (ITR) refund claims have been placed on hold under the department's "risk management process." The message claims that certain discrepancies were identified in the return and advises taxpayers to file a revised return before December 31 to avoid further delays.

What has particularly unsettled recipients is the tone and timing of the alert. Many taxpayers say the messages arrived late at night and referred to a follow-up email containing detailed information, which several recipients insist they never received. This lack of clarity has led to uncertainty over whether the message represents a formal notice or an early warning.

Why Your ITR Refund Is on Hold: Explaining the Income Tax Risk Management Alert

Initial observations suggest that the alerts are being sent primarily to taxpayers who have made high-value claims or disclosures. These include individuals who have claimed deductions for charitable or political donations, reported foreign assets, disclosed demat account holdings, or shown refund amounts significantly higher than usual. In many cases, even taxpayers who believe their filings are accurate have received the alert, deepening the confusion.

Understanding the "Risk Management Process"

Tax experts have clarified that the SMS is not a legal notice or scrutiny order. Gautam Bharthry, Managing Director of BW Batra & Co, explained that the message is part of an internal risk-filtering mechanism used by the Income Tax Department to flag returns that require additional verification.

According to Bharthry, returns are often identified under the risk management process when the department's system detects mismatches or unusual patterns in high-value transactions. These may involve donation claims that do not align with reporting by the recipient organization, inconsistencies in foreign asset disclosures, discrepancies between demat account information and reported income, or refund claims that appear disproportionately large compared to past filings.

In one example cited by Bharthry, a taxpayer who had made a political donation received a risk management alert, even though the donation was genuine. In such cases, the return is temporarily held back until the system receives either clarification or a revised return from the taxpayer. Bharthry added that the department is expected to send detailed emails identifying the specific transaction or claim that triggered the alert, though these communications are still pending for many taxpayers.

Steps Taxpayers Should Take Immediately

Experts strongly advise taxpayers not to panic and to treat the alert as a prompt for careful review rather than a cause for alarm. The first and most important step is to thoroughly review the filed ITR and confirm that all claims and disclosures are accurate and backed by valid documents.

If any mistake, omission, or incorrect claim is identified, taxpayers should file a revised return before the December 31 deadline. Filing a revised return within the allowed timeframe can help resolve issues quickly and prevent potential scrutiny in the future.

 

Additionally, taxpayers are advised to cross-check their Annual Information Statement (AIS) and Form 26AS for mismatches, particularly in high-value transactions such as interest income, capital gains, or donation claims. Providing accurate feedback in the AIS can often resolve discrepancies automatically.

"In many cases, the department has not yet sent the detailed emails. The returns have been flagged internally, and taxpayers will receive transaction-specific information shortly," Bharthry explained. If the return is accurate and all supporting documents are in place, taxpayers can wait for the official communication while monitoring their registered email account and the income tax portal.

 

Is There Any Reason to Worry?

Tax professionals emphasize that the "risk management" alert should not be confused with a scrutiny notice or penalty proceeding. It is essentially a preventive measure designed to encourage taxpayers to recheck their filings before the revision window closes.

However, experts caution that ignoring the alert when genuine discrepancies exist could increase the chances of the case being selected for scrutiny later. On the other hand, taxpayers who have filed correct returns, made truthful disclosures, and maintained proper documentation have little to worry about.

In conclusion, while the message may appear alarming at first glance, it is largely an automated risk filter rather than an accusation of wrongdoing. With careful review, timely action, and proper documentation, most taxpayers can expect their refund processing to resume smoothly once the additional checks are completed.


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Published by

Gautam Bharthry
(Auditor & Tax)
Category Income Tax   Report

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