GST paid on bank charges will be eligible for GST input credit. You will require Bank’s GSTIN to claim the credit.But input tax credits can be claimed, subject to the condition that you have updated your GST profile with Bank so that Bank could file these transactions in his GSTR-1. So in your case you can claim ITC of Bank charges if you have bank gstin.
Department issue a clarification in respect of bank charges that if u provided ur gstn no. to bank and itc is reflected in ur 2A than u can claim itc , there is no need for any separate invoice from bank.