As per Section 52 & SOP on Cbec site Govt is liable to deduct 2% TDS if the contract value exceeds 2.5 lac & TDS deducted will reflect in supplier cash ledger & same can be use to discharge output taxl liability or can claim refund by supplier
GST Deducted form Government Will be Only 2% u have to show the turnover and pay the 12% GST in which u can take the Purchase ITC Bills if there is no excess of ITC Bills u have to pay the excess amount through Bank
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