Penalty on late filing of tds return.

TDS/TCS return cannot be filed without payment of late filing fees. In other words, the late filing fees shall be deposited before filing the TDS return. It should be noted that Rs. 200 per day is not penalty but it is a late filing fee

paid interest whatever applicable 

download the RPU file to revise the original return. Fill the challan details and submit the return.

Once the return is submitted, its done. The systems at CPC will be updated and the penalty will be automatically removed from systems.

Remember only paying penalty will not clear your defaults from CPC servers, you need to revise the returns to update your TDS details available with department.

You can file the return without filling interest

You Can Also Submit Correction Using Traces Portal after u get intimation from CPC traces