GST late fees still showing even filing NIL Return

Dear Banik,

You have to make the payment of late fees as appearing on the window for that month. From next succeeding month, you can file NIL returns or Taxable returns by availing no late fees or by paying Rs. 500 as late fees. I have experienced the same and contacted GST help desk for assistance. The above information is provided by them from the help desk. Also, Kindly note that the amount of late fees paid for that month initially shall not be refunded or credited or returned. There is nothing in refreshing the page or logging in or out. 

Regards

True. I also faced the same issue and paid and after that could file return.