You have to create separate ledger to bifuricate regular purchase and composition purchase. Regular purchase have ITC(gst) and composition purchase has no gst.
You will find the all purchase bill in purchase register. For example. If there are 100 invoices, 2 bills are composition bill. How will you identity the particular bill? If you have created separate ledger like local purchase, inter state purchase, URD purchase and composition purchase- you can identify the particular transactions. I think now you got it.......